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Genetic Architecture of Neutrophil-Mediated Inflammatory Skin Diseases (NEUTROSKIN)

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University Hospital Basel

Status

Enrolling

Conditions

Inflammatory Dermatoses
Neutrophil-mediated Inflammatory Dermatoses

Treatments

Other: Analysis of samples

Study type

Observational

Funder types

Other

Identifiers

NCT05732987
2020-02645 sp19Navarini3;

Details and patient eligibility

About

This study is to identify rare, disease-causing mutations of several rare neutrophil dermatoses. To identify associations between NMID and variants in the genome next generation sequencing, mainly whole exome sequencing, will be used. In a second approach the expression level of already known inflammatory proteins in skin samples will be investigated.

Full description

The origin of rare severe inflammatory skin diseases in dermatology is insufficiently known. They have in common the presence and activation of phagocytes, affect the quality of life through pain and inflammation and disfiguration, and can even be fatal. This study is intended to build on the findings that several of these neutrophil-mediated inflammatory dermatoses (NMID) have a genetic background and to identify rare, disease-causing mutations of several rare neutrophil dermatoses. This non-clinical case-control study is a research project with biological material and health-related data. To identify associations between NMID and variants in the genome next generation sequencing, mainly whole exome sequencing, will be used. In a second approach the expression level of already known inflammatory proteins in skin samples will be investigated. The data are obtained and verified using standardized methods as e.g. Nanostring, RNA sequencing and qRT-polymerase chain reaction (PCR), proteomics assays and immunohistochemistry as well as flow cytometry and imaging mass cytometry, ELISA, and Western Blot.

Enrollment

3,370 estimated patients

Sex

All

Ages

18 to 100 years old

Volunteers

Accepts Healthy Volunteers

Inclusion and exclusion criteria

Inclusion Criteria:

  • written consent of the participating person
  • diagnosis of a disease in the NMID form group or proband of the control group

Exclusion Criteria for patients:

  • Missing informed consent if samples collected after 2014
  • no diagnosis of NMID

Exclusion Criteria for healthy controls:

  • Missing informed consent

Trial design

3,370 participants in 4 patient groups

Biobank- samples from NMID patients
Description:
600 samples from NMID patients from the Biobank Dermatology Unispital Basel (USB) (Biobank USB) and from the biobank of the Dermatology Department of the University Hospital Zürich (USZ) (Biobank USZ) will be included.
Treatment:
Other: Analysis of samples
Other: Analysis of samples
Other: Analysis of samples
Other: Analysis of samples
Formalin-fixed and paraffin-embedded (FFPE) samples
Description:
About 50 of formalin-fixed and paraffin-embedded (FFPE) samples from the Dermatology USB collected before 2014 for RNA and protein expression analyses will be reused. The patients in questions are informed about the study and the coded use of their samples.
Treatment:
Other: Analysis of samples
Other: Analysis of samples
Other: Analysis of samples
Other: Analysis of samples
Biobank- samples from controls
Description:
2'700 anonymized control genomes as well as 150 anonymized control samples for the proteomics approach can be used as control samples from the biobank of the Dermatology Department of the University Hospital Zürich (Biobank Dermatology USZ).
Treatment:
Other: Analysis of samples
Other: Analysis of samples
Other: Analysis of samples
Other: Analysis of samples
Fresh skin samples from healthy donors
Description:
A maximum of 20 fresh skin samples from healthy donors are required per skin location. They will be requested from healthy volunteers after information about the study and receiving the informed consent.
Treatment:
Other: Analysis of samples
Other: Analysis of samples
Other: Analysis of samples
Other: Analysis of samples

Trial contacts and locations

1

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Central trial contact

Emmanuel Contassot, Dr.; Alexander Navarini, Prof. Dr. med.

Data sourced from clinicaltrials.gov

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